The 28-year-old player joined Skra in 2017 and played 146 matches for the team in five seasons.
He became champion of the league with Skra and claimed the Polish Super Cup two times during his time in the team.
Skra has thanked Ebadipour via Twitter and wished him all the best in the future.
Ebadipour has been linked with a move to Italian team Allianz Milano.